Exploration of the hierarchical assembly space of collagen-like peptides beyond the triple helix

Abstract

The de novo design of self-assembling peptides has garnered significant attention in scientific research. While alpha-helical assemblies have been extensively studied, exploration of polyproline type II helices, such as those found in collagen, remains relatively limited. In this study, we focus on understanding the sequence-structure relationship in hierarchical assemblies of collagen-like peptides, using defense collagen Surfactant Protein A as a model. By dissecting the sequence derived from Surfactant Protein A and synthesizing short collagen-like peptides, we successfully construct a discrete bundle of hollow triple helices. Amino acid substitution studies pinpoint hydrophobic and charged residues that are critical for oligomer formation. These insights guide the de novo design of collagen-like peptides, resulting in the formation of diverse quaternary structures, including discrete and heterogenous bundled oligomers, two-dimensional nanosheets, and pH-responsive nanoribbons. Our study represents a significant advancement in the understanding and harnessing of collagen higher-order assemblies beyond the triple helix.

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Yu, L. T., Kreutzberger, M. A. B., Bui, T. H., Hancu, M. C., Farsheed, A. C., Egelman, E. H., & Hartgerink, J. D. (2024). Exploration of the hierarchical assembly space of collagen-like peptides beyond the triple helix. Nature Communications, 15(1), 10385. https://doi.org/10.1038/s41467-024-54560-z

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