A paper and plastic device for the combined isothermal amplification and lateral flow detection of Plasmodium DNA
| dc.citation.articleNumber | 472 | |
| dc.citation.journalTitle | Malaria Journal | |
| dc.citation.volumeNumber | 14 | |
| dc.contributor.author | Cordray, Michael S. | |
| dc.contributor.author | Richards-Kortum, Rebecca R. | |
| dc.date.accessioned | 2016-02-03T18:41:22Z | |
| dc.date.available | 2016-02-03T18:41:22Z | |
| dc.date.issued | 2015 | |
| dc.date.updated | 2016-02-03T18:41:22Z | |
| dc.description.abstract | Background: Isothermal amplification techniques are emerging as a promising method for malaria diagnosis since they are capable of detecting extremely low concentrations of parasite target while mitigating the need for infrastructure and training required by other nucleic acid based tests. Recombinase polymerase amplification (RPA) is promising for further development since it operates in a short time frame (<30 min) and produces a product that can be visually detected on a lateral flow dipstick. A self-sealing paper and plastic system that performs both the amplification and detection of a malaria DNA sequence is presented. Methods: Primers were designed using the NCBI nBLAST tools and screened using gel electrophoresis. Paper and plastic devices were prototyped using commercial design software and parts were cut using a laser cutter and assembled by hand. Synthetic copies of the Plasmodium 18S gene were spiked into solution and used as targets for the RPA reaction. To test the performance of the device the same samples spiked with synthetic target were run in parallel both in the paper and plastic devices and using conventional bench top methods. Results: Novel RPA primers were developed that bind to sequences present in the four species of Plasmodium which infect humans. The paper and plastic devices were found to be capable of detecting as few as 5 copies/µL of synthetic Plasmodium DNA (50 copies total), comparable to the same reaction run on the bench top. The devices produce visual results in an hour, cost approximately $1, and are self-contained once the device is sealed. Conclusions: The device was capable of carrying out the RPA reaction and detecting meaningful amounts of synthetic Plasmodium DNA in a self-sealing and self-contained device. This device may be a step towards making nucleic acid tests more accessible for malaria detection. | |
| dc.identifier.citation | Cordray, Michael S. and Richards-Kortum, Rebecca R.. "A paper and plastic device for the combined isothermal amplification and lateral flow detection of Plasmodium DNA." <i>Malaria Journal,</i> 14, (2015) BioMed Central: http://dx.doi.org/10.1186/s12936-015-0995-6. | |
| dc.identifier.doi | http://dx.doi.org/10.1186/s12936-015-0995-6 | |
| dc.identifier.uri | https://hdl.handle.net/1911/88329 | |
| dc.language.iso | eng | |
| dc.publisher | BioMed Central | |
| dc.rights | This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. | |
| dc.rights.uri | https://creativecommons.org/licenses/by/4.0/ | |
| dc.title | A paper and plastic device for the combined isothermal amplification and lateral flow detection of Plasmodium DNA | |
| dc.type | Journal article | |
| dc.type.dcmi | Text | |
| dc.type.publication | publisher version | |
| local.sword.agent | BioMed Central |