A synthetic circuit for buffering gene dosage variation between individual mammalian cells

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dc.citation.articleNumber4132en_US
dc.citation.journalTitleNature Communicationsen_US
dc.citation.volumeNumber12en_US
dc.contributor.authorYang, Jinen_US
dc.contributor.authorLee, Jihwanen_US
dc.contributor.authorLand, Michelle A.en_US
dc.contributor.authorLai, Shujuanen_US
dc.contributor.authorIgoshin, Oleg A.en_US
dc.contributor.authorSt-Pierre, Françoisen_US
dc.contributor.orgSystems, Synthetic, and Physical Biology Programen_US
dc.date.accessioned2021-08-05T15:51:54Zen_US
dc.date.available2021-08-05T15:51:54Zen_US
dc.date.issued2021en_US
dc.description.abstractPrecise control of gene expression is critical for biological research and biotechnology. However, transient plasmid transfections in mammalian cells produce a wide distribution of copy numbers per cell, and consequently, high expression heterogeneity. Here, we report plasmid-based synthetic circuits – Equalizers – that buffer copy-number variation at the single-cell level. Equalizers couple a transcriptional negative feedback loop with post-transcriptional incoherent feedforward control. Computational modeling suggests that the combination of these two topologies enables Equalizers to operate over a wide range of plasmid copy numbers. We demonstrate experimentally that Equalizers outperform other gene dosage compensation topologies and produce as low cell-to-cell variation as chromosomally integrated genes. We also show that episome-encoded Equalizers enable the rapid generation of extrachromosomal cell lines with stable and uniform expression. Overall, Equalizers are simple and versatile devices for homogeneous gene expression and can facilitate the engineering of synthetic circuits that function reliably in every cell.en_US
dc.identifier.citationYang, Jin, Lee, Jihwan, Land, Michelle A., et al.. "A synthetic circuit for buffering gene dosage variation between individual mammalian cells." <i>Nature Communications,</i> 12, (2021) Springer Nature: https://doi.org/10.1038/s41467-021-23889-0.en_US
dc.identifier.digitals41467-021-23889-0en_US
dc.identifier.doihttps://doi.org/10.1038/s41467-021-23889-0en_US
dc.identifier.urihttps://hdl.handle.net/1911/111138en_US
dc.language.isoengen_US
dc.publisherSpringer Natureen_US
dc.rightsThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder.en_US
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/en_US
dc.titleA synthetic circuit for buffering gene dosage variation between individual mammalian cellsen_US
dc.typeJournal articleen_US
dc.type.dcmiTexten_US
dc.type.publicationpublisher versionen_US
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