Trapped ions offer a controlled and versatile platform for the simulation of spin and spin-boson quantum systems. The Coulomb interaction between ions trapped in a harmonic potential can be used to mediate interactions between effective spins in the ion chain. Generally, coherent operations on ions are performed on ground-state qubits encoded in magnetically insensitive hyperfine sublevels. In this thesis, we extend this toolbox with the aim of simultaneously manipulating both ground-state and optical qubits, with the latter encoded in metastable optically excited states. The optical qubit provides another set of coherent and dissipative operations that can be performed on the ions, opening new avenues for quantum computing and simulation. In our experiment, we use 171Yb+ and 172Yb+ ions to encode ground-state and optical qubits. We discuss the laser setup needed to address the narrow quadrupole transition from 2S1/2 →2 D3/2 of 3.02 Hz linewidth, and we describe spectroscopy techniques to study this transition in both the isotopes. We describe how the low linewidth allows resolved sideband cooling on the shared motional modes in an ion chain, enabling sympathetic cooling with one ion, 172Yb+ , while simultaneously performing coherent operations on the 171Yb+ ion. Finally, we discuss the prospects of using this tool for light-shift entangling gates, showing the flexibility of this trapped-ion system for simulating coherent as well as dissipative quantum systems.