Parallelizing Interproscan with SLURM

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interproscan-master.zip (177.95 MB)
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6/27/2023
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Rice University
Abstract

This repository contains code to facilitate analysis of large numbers of proteins by Interproscan with minimum user oversight and efficient use of computational resources. It provides templates for parallelizing Interproscan with SLURM on the Rice NOTS computing cluster, following a high-throughput computing model.

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Fulk, Emily M., Goldman, Annelise L., Momper, Lily, Heider, Clinton, Mulligan, John, Osburn, Magdalena, Masiello, Caroline A. and Silberg, Jonathan J. (2023): Parallelizing Interproscan with SLURM. [Dataset]. Rice University. https://doi.org/10.25611/4S05-X831

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https://doi.org/10.25611/4S05-X831
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https://hdl.handle.net/1911/114920
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