Genotypic diversity and population structure in Dictyostelium discoideum
| dc.contributor.advisor | Strassmann, Joan E. | en_US |
| dc.contributor.advisor | Queller, David C. | en_US |
| dc.creator | Smith, Margaret Harris | en_US |
| dc.date.accessioned | 2009-06-04T08:15:27Z | en_US |
| dc.date.available | 2009-06-04T08:15:27Z | en_US |
| dc.date.issued | 2004 | en_US |
| dc.description.abstract | Current population genetics literature presumes a lack of population structure in microorganisms due to their large population sizes, ubiquitous dispersal, and absence of geographic barriers. Contrary to this, we found evidence of great population subdivision in the social amoeba, Dictyostelium discoideum. Pairwise values of Fst and Rst were significant between samples collected from sites separated by distances from 100m--10,000km (P < 0.05 after sequential Bonferroni). Three- and two-level analyses of molecular variance (AMOVA) confirmed the existence of population structure (Fst 0.30, Rst = 0.48, P < 0.001 for three-level; Fst = 0.297, Rst = 0.474, P < 0.001 for two-level). Further, linearized pairwise Fst values were significantly correlated with natural logarithm of geographic distance (r = 0.471, P < 0.012) indicating isolation by distance. Genotypic diversity of populations remained moderate (Nei (1987) average gene diversity ∼0.50) in spite of the decreased population diversity expected with such Fst and Rst values. | en_US |
| dc.format.extent | 20 p. | en_US |
| dc.format.mimetype | application/pdf | en_US |
| dc.identifier.callno | THESIS ECOL. 2004 SMITH | en_US |
| dc.identifier.citation | Smith, Margaret Harris. "Genotypic diversity and population structure in Dictyostelium discoideum." (2004) Master’s Thesis, Rice University. <a href="https://hdl.handle.net/1911/17730">https://hdl.handle.net/1911/17730</a>. | en_US |
| dc.identifier.uri | https://hdl.handle.net/1911/17730 | en_US |
| dc.language.iso | eng | en_US |
| dc.rights | Copyright is held by the author, unless otherwise indicated. Permission to reuse, publish, or reproduce the work beyond the bounds of fair use or other exemptions to copyright law must be obtained from the copyright holder. | en_US |
| dc.subject | Molecular biology | en_US |
| dc.subject | Genetics | en_US |
| dc.title | Genotypic diversity and population structure in Dictyostelium discoideum | en_US |
| dc.type | Thesis | en_US |
| dc.type.material | Text | en_US |
| thesis.degree.department | Ecology and Evolutionary Biology | en_US |
| thesis.degree.discipline | Natural Sciences | en_US |
| thesis.degree.grantor | Rice University | en_US |
| thesis.degree.level | Masters | en_US |
| thesis.degree.name | Master of Arts | en_US |
Files
Original bundle
1 - 1 of 1