Expression, Folding, and Assembly Mechanisms of Monomeric Myoglobins and Oligomeric Hemoglobins

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dc.contributor.advisorPhillips, George N.en_US
dc.contributor.committeeMemberOlson, John S.en_US
dc.creatorMohan Dass, Premila Pen_US
dc.date.accessioned2019-02-11T20:59:01Zen_US
dc.date.available2019-02-11T20:59:01Zen_US
dc.date.created2017-12en_US
dc.date.issued2017-11-16en_US
dc.date.submittedDecember 2017en_US
dc.date.updated2019-02-11T20:59:01Zen_US
dc.description.abstractDespite differing in quaternary structure and protein sequence, mammalian myoglobins and hemoglobins share similar overall globin folds and nearly identical active site structures. The folding mechanism for monomeric apomyoglobin is a well-characterized 2-step pathway involving a molten globule intermediate containing an unfolded heme pocket. Holomyoglobin assembly involves reversible hemin binding to both the molten globule and fully folded apomyoglobin. A wheat germ based cell-free expression assay was developed to show that production levels of folded holomyoglobins correlate quantitatively with their overall apomyoglobin stability constants. Higher cell-free expression levels were also observed for myoglobin mutants with heme cavity filling mutations that significantly increase apomyoglobin stability at the expense of hemin binding affinity. The new in vitro results are consistent with previous observations of myoglobin expression in animal muscle cells and E. coli, all of which demonstrate that apomyoglobin stability is the key determinant of holoprotein expression. In contrast to myoglobin, the individual α and β apoglobin subunits of adult human hemoglobin A (HbA) are extremely unstable, despite being structurally similar to apomyoglobin. GdnHCl induced unfolding curves were measured for human apo- and holo- HbA, fetal hemoglobin, and recombinant hemoglobins with either heme cavity filling apolar mutations or a genetically crosslinked di-α subunit. A mathematical model for hemoglobin tetramer assembly was developed, starting with the mechanism for apohemoglobin folding and adding heme binding steps for each of the different apoprotein states. The unfolding pathway for the heterodimeric apohemoglobin is a 4-step, 5-state mechanism. The first step involves unfolding of the heme pockets to form a heterodimeric molten globule intermediate. This intermediate dissociates into mostly unfolded monomers that then either interact transiently or undergo complete unfolding. Reversible hemin binding to the folded αβ apoHb dimer facilitates formation of the tetrameric α1β2 interfaces, promoting the final assembly of the HbA tetramer. Both the experimental studies and mathematical modeling of hemoglobin assembly provide the framework for understanding human hemoglobinopathies arising from globin misfolding and for enhancing the production yields of heme proteins in bacterial and eukaryotic expression systems.en_US
dc.format.mimetypeapplication/pdfen_US
dc.identifier.citationMohan Dass, Premila P. "Expression, Folding, and Assembly Mechanisms of Monomeric Myoglobins and Oligomeric Hemoglobins." (2017) Diss., Rice University. <a href="https://hdl.handle.net/1911/105154">https://hdl.handle.net/1911/105154</a>.en_US
dc.identifier.urihttps://hdl.handle.net/1911/105154en_US
dc.language.isoengen_US
dc.rightsCopyright is held by the author, unless otherwise indicated. Permission to reuse, publish, or reproduce the work beyond the bounds of fair use or other exemptions to copyright law must be obtained from the copyright holder.en_US
dc.subjectProtein foldingen_US
dc.subjectglobinsen_US
dc.titleExpression, Folding, and Assembly Mechanisms of Monomeric Myoglobins and Oligomeric Hemoglobinsen_US
dc.typeThesisen_US
dc.type.materialTexten_US
thesis.degree.departmentBiochemistry and Cell Biologyen_US
thesis.degree.disciplineNatural Sciencesen_US
thesis.degree.grantorRice Universityen_US
thesis.degree.levelDoctoralen_US
thesis.degree.majorProtein foldingen_US
thesis.degree.nameDoctor of Philosophyen_US
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